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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs62543604 chr9:36027527 T/C 1.07E-5 468 15.7 15.08 17.93 KM Plot
THCA rs62583632 chr9:132724238 A/C 0.000116 485 16.3 14.23 23.63 KM Plot
THCA rs629476 chr6:150673394 T/C 0 485 17.77 17.83 15.77 KM Plot
THCA rs630011 chr2:224616156 A/G 0.000104 474 16.07 16.4 15.33 KM Plot
THCA rs6419697 chr2:29101045 T/A 0.000106 488 14.3 15.22 15.97 KM Plot
THCA rs6424578 chr1:74793813 A/G 5.13E-9 490 15.93 16.4 15.3 KM Plot
THCA rs6427341 chr1:157022296 A/C 1.65E-7 483 16.63 15.05 11.98 KM Plot
THCA rs6429567 chr1:45956700 C/A 4.16E-5 488 10.4 16.18 16.97 KM Plot
THCA rs6431505 chr2:238001987 A/G 5.07E-8 490 15.68 16.37 33.97 KM Plot
THCA rs6441026 chr3:155611557 T/G 0.000207 487 9 14.63 16.57 KM Plot
THCA rs6442027 chr3:46787310 C/T 6.06E-8 483 15.9 15.57 5.8 KM Plot
THCA rs6450314 chr5:54823262 T/C 0 482 15.9 16.22 5.8 KM Plot
THCA rs6452434 chr5:81172212 A/G 7.91E-11 490 15.48 14.93 16.23 KM Plot
THCA rs6454082 chr6:79487282 A/G 6.3E-6 490 13.97 17.7 15.48 KM Plot
THCA rs6471694 chr8:59164565 C/T 6.98E-13 488 16.13 13.93 13.33 KM Plot